STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23398.1Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein; manually curated. (61 aa)    
Predicted Functional Partners:
EIC23397.1
PFAM: Uncharacterised protein family (UPF0150).
 
 
 
 0.996
EIC23395.1
PFAM: Uncharacterised protein family (UPF0150).
 
 
 
 0.733
EIC19927.1
PFAM: Uncharacterised protein family (UPF0150).
  
 
 
 0.597
EIC23000.1
PFAM: Uncharacterised protein family (UPF0150); manually curated.
  
 
 
 0.595
EIC23940.1
PFAM: Uncharacterised protein family (UPF0150).
    
 
 0.514
EIC21541.1
Hypothetical protein.
    
 
 0.514
EIC19747.1
PFAM: Uncharacterised protein family (UPF0150).
    
 
 0.514
EIC19783.1
PFAM: Protein of unknown function (DUF3532).
    
 
 0.514
EIC21061.1
PFAM: Protein of unknown function (DUF3532).
    
 
 0.514
EIC23399.1
Hypothetical protein.
       0.405
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.