STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23619.1PFAM: Inner membrane protein CreD. (485 aa)    
Predicted Functional Partners:
EIC23618.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
   
 0.908
EIC23617.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
     0.699
EIC21600.1
PFAM: Predicted integral membrane protein (DUF2269).
  
     0.490
EIC23614.1
Hypothetical protein.
       0.440
EIC23615.1
Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein.
       0.440
EIC23616.1
Type I restriction-modification system methyltransferase subunit; PFAM: HsdM N-terminal domain.
       0.440
EIC21340.1
Hypothetical protein.
  
    0.426
EIC23620.1
Hypothetical protein.
       0.424
EIC19826.1
Uncharacterized protein conserved in bacteria, putative lipoprotein; PFAM: Protein of unknown function (DUF1311).
  
     0.424
EIC20298.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.422
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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