STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC21355.1TIGRFAM: putative photosynthetic complex assembly protein. (170 aa)    
Predicted Functional Partners:
EIC21357.1
Photosynthetic reaction center, subunit H, bacterial; PFAM: Photosynthetic reaction centre, H-chain N-terminal region; PRC-barrel domain; TIGRFAM: photosynthetic reaction center, subunit H, bacterial.
 
    0.979
EIC21356.1
Hypothetical protein.
 
    0.977
EIC21354.1
PFAM: Protein of unknown function (DUF3623); TIGRFAM: putative photosynthetic complex assembly protein 2.
 
    0.962
EIC21358.1
PFAM: Magnesium-protoporphyrin IX methyltransferase C-terminus; TIGRFAM: magnesium protoporphyrin O-methyltransferase.
 
    0.883
EIC20307.1
Arabinose efflux permease family protein; PFAM: PUCC protein.
 
    0.868
EIC20046.1
PFAM: Photosynthetic reaction centre protein; manually curated; partial gene; Belongs to the reaction center PufL/M/PsbA/D family.
  
  
 0.861
pufL
Photosynthetic reaction center L subunit; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosynthetic reaction center L subunit.
  
  
 0.861
pufM
Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
  
  
 0.854
EIC20310.1
PFAM: 2-vinyl bacteriochlorophyllide hydratase (BCHF); TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase.
 
    0.830
bchN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
    0.820
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.