Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIC20841.1 | EIC22540.1 | Thi970DRAFT_04506 | Thi970DRAFT_02808 | Putative cobalamin binding protein; PFAM: B12 binding domain. | PFAM: Transposase domain (DUF772). | 0.411 |
EIC20920.1 | EIC22540.1 | Thi970DRAFT_04595 | Thi970DRAFT_02808 | Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | PFAM: Transposase domain (DUF772). | 0.444 |
EIC22539.1 | EIC22540.1 | Thi970DRAFT_02807 | Thi970DRAFT_02808 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | PFAM: Transposase domain (DUF772). | 0.405 |
EIC22540.1 | EIC20841.1 | Thi970DRAFT_02808 | Thi970DRAFT_04506 | PFAM: Transposase domain (DUF772). | Putative cobalamin binding protein; PFAM: B12 binding domain. | 0.411 |
EIC22540.1 | EIC20920.1 | Thi970DRAFT_02808 | Thi970DRAFT_04595 | PFAM: Transposase domain (DUF772). | Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.444 |
EIC22540.1 | EIC22539.1 | Thi970DRAFT_02808 | Thi970DRAFT_02807 | PFAM: Transposase domain (DUF772). | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | 0.405 |
EIC22540.1 | EIC23449.1 | Thi970DRAFT_02808 | Thi970DRAFT_01115 | PFAM: Transposase domain (DUF772). | TIGRFAM: TIGR03790 family protein. | 0.430 |
EIC23449.1 | EIC22540.1 | Thi970DRAFT_01115 | Thi970DRAFT_02808 | TIGRFAM: TIGR03790 family protein. | PFAM: Transposase domain (DUF772). | 0.430 |