rpmE protein (Thiorhodovibrio sp. 970) - STRING interaction network

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gene neighborhood

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Score

rpmE

Ribosomal protein L31; Binds the 23S rRNA. (66 aa)

Predicted Functional Partners:

rpsT

0.996

rplM

0.996

rpsP

0.996

rplS

0.996

rpmB

0.996

rpsO

0.996

rpmA

0.996

rplU

0.996

rpsI

0.995

rpmF

0.995

Your Current Organism:

Thiorhodovibrio sp. 970

NCBI taxonomy Id: 631362
Other names: T. sp. 970

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplS	Thi970DRAFT_02186	Thi970DRAFT_02443	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.996
rplM	rplU	Thi970DRAFT_02186	Thi970DRAFT_03931	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	Thi970DRAFT_02186	Thi970DRAFT_03930	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	Thi970DRAFT_02186	Thi970DRAFT_03282	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplM	rpmE	Thi970DRAFT_02186	Thi970DRAFT_03049	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L31; Binds the 23S rRNA.	0.996
rplM	rpmF	Thi970DRAFT_02186	Thi970DRAFT_03601	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.995
rplM	rpsI	Thi970DRAFT_02186	Thi970DRAFT_02185	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	Thi970DRAFT_02186	Thi970DRAFT_03784	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.998
rplM	rpsP	Thi970DRAFT_02186	Thi970DRAFT_02440	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplM	rpsT	Thi970DRAFT_02186	Thi970DRAFT_01550	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996
rplS	rplM	Thi970DRAFT_02443	Thi970DRAFT_02186	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.996
rplS	rplU	Thi970DRAFT_02443	Thi970DRAFT_03931	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplS	rpmA	Thi970DRAFT_02443	Thi970DRAFT_03930	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplS	rpmB	Thi970DRAFT_02443	Thi970DRAFT_03282	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplS	rpmE	Thi970DRAFT_02443	Thi970DRAFT_03049	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein L31; Binds the 23S rRNA.	0.996
rplS	rpmF	Thi970DRAFT_02443	Thi970DRAFT_03601	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplS	rpsI	Thi970DRAFT_02443	Thi970DRAFT_02185	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.	0.996
rplS	rpsO	Thi970DRAFT_02443	Thi970DRAFT_03784	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
rplS	rpsP	Thi970DRAFT_02443	Thi970DRAFT_02440	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplS	rpsT	Thi970DRAFT_02443	Thi970DRAFT_01550	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.991