STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC19692.1Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (284 aa)    
Predicted Functional Partners:
EIC22239.1
Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; 2-nitropropane dioxygenase; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.963
EIC22187.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
    
  0.884
EIC20389.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Male sterility protein; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; thioester reductase domain.
  
 
 0.812
EIC20266.1
Non-ribosomal peptide synthase; PFAM: AMP-binding enzyme.
  
 
 0.703
EIC22691.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Acyltransferase; AMP-binding enzyme; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
  
 0.639
EIC20261.1
Dehydrogenase of unknown specificity; PFAM: short chain dehydrogenase.
 
 
 0.639
EIC19693.1
PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.
       0.630
EIC20278.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
 
  
 0.623
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
      0.596
EIC22238.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.582
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.