STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC19751.1PFAM: Domain of unknown function DUF29. (150 aa)    
Predicted Functional Partners:
EIC22843.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
    
 0.889
EIC23629.1
PFAM: Ankyrin repeat.
    
 0.889
EIC22129.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
    
 0.889
EIC20664.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
    
 0.889
EIC20534.1
Putative exonuclease of the beta-lactamase fold involved in RNA processing; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.
   
  0.875
EIC23994.1
Hypothetical protein.
    
 0.843
EIC24021.1
DNA-directed RNA polymerase, beta subunit/140 kD subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb2, domain 6; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb2, domain 7.
   
 
 0.829
EIC21611.1
PFAM: Protein of unknown function (DUF2983).
    
  0.816
EIC22039.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
  0.674
EIC20655.1
PFAM: Protein kinase domain; RyR domain.
   
 0.614
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.