STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC19781.1Hypothetical protein; Manually curated; partial gene. (349 aa)    
Predicted Functional Partners:
EIC19780.1
Hypothetical protein; Manually curated; partial gene.
  
  0.989
EIC19811.1
Hypothetical protein.
 
  
  0.961
EIC19771.1
PFAM: Tetratricopeptide repeat.
  0.887
EIC21707.1
Hypothetical protein.
  
 0.811
EIC19802.1
Hypothetical protein; Manually curated; partial gene.
 
  
 
0.810
EIC20512.1
Putative O-linked N-acetylglucosamine transferase, SPINDLY family; PFAM: Tetratricopeptide repeat; manually curated.
 
  
 
0.794
EIC20502.1
Hypothetical protein.
 
  
 
0.789
EIC20525.1
Putative O-linked N-acetylglucosamine transferase, SPINDLY family; PFAM: Tetratricopeptide repeat.
 
  
 
0.777
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.724
EIC19782.1
Methyltransferase family protein; PFAM: Predicted methyltransferase regulatory domain; Methyltransferase domain; manually curated.
       0.709
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.