STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC19823.1PFAM: Transposase IS200 like. (232 aa)    
Predicted Functional Partners:
EIC21990.1
PFAM: Transposase IS200 like.
  
     0.770
EIC19822.1
Hypothetical protein.
       0.727
EIC19819.1
PFAM: Cephalosporin hydroxylase.
       0.626
EIC19820.1
Hypothetical protein.
       0.626
EIC19821.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2136).
       0.626
EIC19818.1
PFAM: Tetratricopeptide repeat; alpha/beta hydrolase fold.
       0.574
EIC19346.1
Chorismate mutase, clade 2; PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2.
    
  0.454
ureC
PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit.
    
   0.448
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.