STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EIC20038.1Putative secreted hydrolase; PFAM: Hydroxyneurosporene synthase (CrtC). (409 aa)    
Predicted Functional Partners:
EIC19382.1
Phytoene desaturase; PFAM: FAD dependent oxidoreductase; TIGRFAM: phytoene desaturase.
 
 
 0.979
EIC23328.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
 
 0.964
EIC20314.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family.
  
 
 0.888
EIC23327.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
  
 0.865
bchN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
    0.856
EIC20039.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; O-methyltransferase.
  
  
 0.817
EIC20042.1
PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Y.
 
  
 0.815
EIC20043.1
PFAM: Proto-chlorophyllide reductase 57 kD subunit; Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Z.
 
    0.815
EIC21355.1
TIGRFAM: putative photosynthetic complex assembly protein.
  
   
 0.814
EIC20040.1
TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
  
 0.810
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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