STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC20135.1Plasmid stability protein. (85 aa)    
Predicted Functional Partners:
vapC-10
Putative nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.983
EIC21690.1
Putative nucleic acid-binding protein; Contains PIN domain; PFAM: PIN domain.
 
 
 
 0.922
vapC-14
Putative nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.908
vapC-3
Putative nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.869
EIC22892.1
Putative nucleic acid-binding protein; Contains PIN domain; PFAM: PIN domain.
 
 
 
 0.840
vapC-11
Putative nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.829
EIC20134.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Sigma-54 interaction domain.
       0.608
EIC20133.1
Hypothetical protein.
       0.475
EIC22954.1
Hypothetical protein.
    
   0.448
vapC-2
Putative nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
    
   0.448
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.