STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC20287.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (363 aa)    
Predicted Functional Partners:
EIC20283.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; overlaps another CDS with the same product name.
 
     0.882
EIC20285.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
 
 
  0.871
EIC20289.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I.
 
 
 0.865
EIC20290.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    
0.848
EIC20288.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
    0.830
EIC20291.1
Hypothetical protein.
       0.768
EIC20286.1
Hypothetical protein.
       0.752
EIC20284.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; overlaps another CDS with the same product name.
 
    
0.672
EIC22539.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.671
EIC20801.1
PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.616
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.