STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC20358.1PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC. (250 aa)    
Predicted Functional Partners:
EIC20357.1
FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 0.999
EIC20359.1
FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 0.999
EIC20360.1
FeS assembly SUF system protein; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
  
 0.983
EIC20227.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
  
 0.976
EIC23375.1
Helicase family protein with metal-binding cysteine cluster; PFAM: Helicase conserved C-terminal domain.
  
  
 0.848
EIC20592.1
NifQ; PFAM: NifQ.
  
  
 0.848
EIC22105.1
SufE protein probably involved in Fe-S center assembly; PFAM: Fe-S metabolism associated domain.
 
   0.844
EIC19509.1
SufE protein probably involved in Fe-S center assembly; PFAM: Fe-S metabolism associated domain.
 
   0.816
EIC22106.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: iron-sulfur cluster assembly protein IscA; Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.790
EIC20558.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.560
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.