STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC21061.1PFAM: Protein of unknown function (DUF3532). (90 aa)    
Predicted Functional Partners:
EIC21060.1
Hypothetical protein.
 
    0.948
EIC19784.1
Hypothetical protein.
 
    0.775
EIC19783.1
PFAM: Protein of unknown function (DUF3532).
  
     0.761
EIC19748.1
PFAM: YcfA-like protein; manually curated.
  
 
 
 0.645
EIC21058.1
Putative signal transduction protein; PFAM: HDOD domain.
 
     0.572
EIC23941.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein.
    
 
 0.514
EIC22999.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein; manually curated.
    
 
 0.514
EIC23396.1
PFAM: YcfA-like protein; manually curated.
    
 
 0.514
EIC23398.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein; manually curated.
    
 
 0.514
EIC21542.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein.
    
 
 0.514
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.