STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC19340.1Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase. (366 aa)    
Predicted Functional Partners:
EIC19341.1
PFAM: Acetyltransferase (GNAT) family.
 
   
 0.920
EIC19339.1
Mg2+ transporter MgtE; Acts as a magnesium transporter.
       0.626
EIC21371.1
Exo-beta-1,3-glucanase; PFAM: Glycosyl transferase family 2; Glycosyl hydrolases family 17.
  
 
 0.610
EIC21295.1
PFAM: Glycosyl transferase family 2.
  
 
 0.578
EIC21529.1
Cellulose synthase catalytic subunit (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
 
 0.578
EIC19338.1
Putative endonuclease containing a URI domain.
       0.506
EIC22773.1
Hypothetical protein.
 
     0.421
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.