STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0042Cytochrome c family protein. (194 aa)    
Predicted Functional Partners:
N177_2813
Cytochrome c oxidase polypeptide III; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.901
N177_2812
Cytochrome c oxidase polypeptide II.
 
 
 0.896
N177_2815
Putative protein-signal peptide and transmembrane prediction.
    0.844
N177_3328
Cytochrome c oxidase polypeptide II.
 
 
 0.819
N177_2814
Hypothetical protein.
 
     0.805
N177_0937
Cytochrome c oxidase subunit CcoO.
  
 0.779
N177_0041
Hypothetical protein involved in heavy metal export.
 
     0.774
N177_0936
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
 0.769
N177_0243
Sulfite dehydrogenase cytochrome subunit SoxD.
  
 
 0.713
N177_0469
Cytochrome c2.
  
 
 0.713
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.