STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0139Protein of unknown function DUF1236. (208 aa)    
Predicted Functional Partners:
engB
GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.682
N177_3689
OmpA/MotB.
  
     0.672
N177_0673
Hypothetical protein.
  
     0.625
N177_3858
Hypothetical protein.
  
     0.520
N177_2741
Hypothetical protein involved in heavy metal export.
  
     0.505
N177_3478
Hypothetical protein.
  
     0.486
N177_0138
Hypothetical protein.
       0.459
N177_0140
Alkaline phosphatase.
       0.407
N177_3384
Hypothetical protein.
  
     0.407
N177_1543
Hypothetical protein.
  
     0.402
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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