STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0172Putative ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (313 aa)    
Predicted Functional Partners:
N177_0173
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
N177_0174
Putative ABC sugar transporter, fused ATPaseprotein.
 
 0.990
N177_0815
Putative permease protein of sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
N177_0175
Bmp family protein.
 
 
 0.958
N177_0814
Sugar ABC transporter, ATP-binding protein.
 
 0.958
N177_0818
Bmp family protein.
 
 
 0.893
N177_0171
Cytosine deaminase.
 
    0.799
N177_0260
Ribose ABC transport system, ATP-binding protein RbsA; TCDB 3.A.1.2.1.
  
  0.681
N177_0176
Hypothetical protein.
       0.603
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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