STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0252Regulatory protein SoxS. (121 aa)    
Predicted Functional Partners:
N177_0250
Thioredoxin SoxW.
 
     0.900
N177_0254
Lipocalin-related protein and Bos/Can/Equ allergen.
 
     0.878
N177_0249
Sulfur oxidation protein SoxX.
 
     0.845
N177_0248
Sulfur oxidation protein SoxY.
 
     0.843
N177_0247
Sulfur oxidation protein SoxZ.
 
     0.841
N177_0246
Sulfur oxidation protein SoxA.
 
     0.830
N177_0245
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
     0.816
N177_0243
Sulfite dehydrogenase cytochrome subunit SoxD.
 
     0.815
N177_0244
Sulfur oxidation molybdopterin C protein.
 
     0.810
N177_0240
Hypothetical protein.
 
     0.793
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.