STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0321N-acetylmuramoyl-L-alanine amidase. (234 aa)    
Predicted Functional Partners:
thiE
Thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
      0.895
N177_0322
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase.
       0.768
N177_0323
Permease of the drug/metabolite transporter (DMT) superfamily.
 
     0.711
N177_0324
DnaJ-like protein DjlA.
     
 0.704
N177_3609
Beta N-acetyl-glucosaminidase.
 
   
 0.629
N177_1333
ATPase YjeE, predicted to have essential role in cell wall biosynthesis; Predicted phosphotransferase.
  
  
 0.577
N177_1334
Nucleotidyltransferase.
  
     0.568
N177_0320
Soluble lytic murein transglycosylase.
     
 0.528
N177_0325
5-oxoprolinase.
       0.501
anmK
Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
  
   
 0.483
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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