Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
N177_0474 | N177_0538 | Hypothetical protein. | Hypothetical protein. | 0.677 |
N177_0474 | N177_0539 | Hypothetical protein. | Amino acid regulated cytosolic protein. | 0.575 |
N177_0474 | N177_1090 | Hypothetical protein. | Hypothetical protein. | 0.759 |
N177_0474 | N177_1316 | Hypothetical protein. | Hypothetical protein. | 0.635 |
N177_0474 | N177_2264 | Hypothetical protein. | Signal recognition particle GTPase. | 0.773 |
N177_0474 | N177_2564 | Hypothetical protein. | Hypothetical protein. | 0.743 |
N177_0474 | N177_3176 | Hypothetical protein. | Putative exported protein. | 0.503 |
N177_0538 | N177_0474 | Hypothetical protein. | Hypothetical protein. | 0.677 |
N177_0538 | N177_0539 | Hypothetical protein. | Amino acid regulated cytosolic protein. | 0.994 |
N177_0538 | N177_0540 | Hypothetical protein. | Hypothetical protein. | 0.626 |
N177_0538 | N177_0541 | Hypothetical protein. | Enoyl-CoA hydratase. | 0.550 |
N177_0538 | N177_0852 | Hypothetical protein. | Murein endopeptidase. | 0.591 |
N177_0538 | N177_1090 | Hypothetical protein. | Hypothetical protein. | 0.719 |
N177_0538 | N177_1316 | Hypothetical protein. | Hypothetical protein. | 0.662 |
N177_0538 | N177_2264 | Hypothetical protein. | Signal recognition particle GTPase. | 0.711 |
N177_0538 | N177_2564 | Hypothetical protein. | Hypothetical protein. | 0.604 |
N177_0538 | N177_3176 | Hypothetical protein. | Putative exported protein. | 0.584 |
N177_0539 | N177_0474 | Amino acid regulated cytosolic protein. | Hypothetical protein. | 0.575 |
N177_0539 | N177_0538 | Amino acid regulated cytosolic protein. | Hypothetical protein. | 0.994 |
N177_0539 | N177_0540 | Amino acid regulated cytosolic protein. | Hypothetical protein. | 0.626 |
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