STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0582Branched-chain amino acid ABC transporter, amino acid-binding protein; TCDB 3.A.1.4.1. (375 aa)    
Predicted Functional Partners:
N177_0584
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.992
N177_0583
High-affinity branched-chain amino acid transport system permease protein LivH; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
  0.990
N177_2957
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.972
N177_0585
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 
  0.902
N177_0586
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1.
 
 
  0.885
N177_1516
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.885
N177_4193
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.881
N177_3147
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.879
N177_0725
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.878
N177_0328
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.857
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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