STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_0951Ferrichrome-iron receptor. (715 aa)    
Predicted Functional Partners:
N177_2829
Hypothetical protein.
 
 
 0.734
N177_1034
Hypothetical protein.
  
 
 0.693
N177_2834
TonB-dependent hemin, ferrichrome receptor.
  
  
 0.682
N177_2948
Iron-chelator utilization protein.
 
    0.555
N177_2354
Ferrichrome-iron receptor.
 
  
0.506
N177_2355
Transcriptional regulator, AraC family.
 
   
 0.492
N177_0952
Transporter, MFS superfamily.
     
 0.472
N177_2359
The iron-vibriobactin/enterobactin uptake porter.
 
  
 0.458
N177_2641
Ferrichrome-iron receptor.
 
  
0.437
N177_2649
Hypothetical protein.
  
     0.435
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.