STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_1069Polar amino acid uptake family ABC transporter, permease protein. (248 aa)    
Predicted Functional Partners:
N177_1067
Glutamine ABC transporter, ATP-binding protein.
 0.998
N177_1068
Glutamate transport membrane-spanning protein.
 
 
0.995
N177_1070
Polar amino acid uptake family ABC transporter, periplasmic substrate- binding protein.
  0.983
N177_0522
Amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  0.982
N177_3806
ABC-type polar amino acid transport system, ATPase component.
 0.930
N177_2403
Amino acid ABC transporter, ATP-binding protein.
 0.928
N177_3411
ABC-type polar amino acid transport system, ATPase component.
 0.922
N177_3044
Hypothetical protein.
 
  0.891
N177_1579
Amino acid ABC transporter, binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.848
N177_3804
Amino acid ABC transporter, periplasmic amino acid-binding portion; Belongs to the bacterial solute-binding protein 3 family.
  0.846
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
Server load: low (30%) [HD]