STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_1478Hypothetical protein. (289 aa)    
Predicted Functional Partners:
N177_1477
Substrate-specific component BioY of biotin ECF transporter.
       0.548
N177_1476
Methylcrotonyl-CoA carboxylase biotin-containing subunit.
       0.518
N177_1475
Biotin/lipoate binding domain protein.
       0.505
N177_2414
Putative formate dehydrogenase iron-sulfur subunit.
   
    0.497
N177_3783
Formate dehydrogenase O beta subunit.
   
    0.497
N177_4001
Putative formate dehydrogenase iron-sulfur subunit.
   
    0.497
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.