STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_1587Transcriptional regulator, Crp/Fnr family. (232 aa)    
Predicted Functional Partners:
N177_2700
Glutamate synthase [NADPH] large chain.
    
 0.851
N177_1592
Respiratory nitrate reductase delta chain.
 
  
 0.848
N177_3140
Adenylate cyclase.
   
 0.846
N177_1589
Nitrate/nitrite transporter.
 
    0.839
N177_1593
Respiratory nitrate reductase gamma chain.
 
  
 0.816
N177_1586
Hypothetical protein.
 
     0.802
N177_1588
Nitrate/nitrite transporter.
 
    0.797
N177_1596
Hypothetical protein.
 
    0.794
N177_1594
Peptidyl-prolyl cis-trans isomerase ppiD.
 
    0.789
N177_2582
Hypothetical protein.
   
 0.784
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.