STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_1602Vanadium-dependent bromoperoxidase 2. (283 aa)    
Predicted Functional Partners:
N177_3824
Hypothetical protein.
  
 
 0.714
N177_0147
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.699
N177_3136
TonB, C-terminal domain protein.
 
 
 0.692
N177_0839
Alcohol dehydrogenase.
   
    0.682
N177_1333
ATPase YjeE, predicted to have essential role in cell wall biosynthesis; Predicted phosphotransferase.
    
  0.610
N177_1356
Arylesterase precursor.
   
 
 0.602
N177_3609
Beta N-acetyl-glucosaminidase.
     
 0.599
N177_0855
Hypothetical protein.
    
  0.596
aroQ
3-dehydroquinate dehydratase II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
    
  0.585
N177_0362
Anthranilate synthase component II.
   
 
  0.580
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.