STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_2244Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
N177_0450
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.763
N177_2217
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.761
N177_1196
Putative transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.754
N177_0651
TcuR: regulates tcuABC used in utilization of tricarballylate; Belongs to the LysR transcriptional regulatory family.
  
     0.738
N177_1511
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.730
N177_3993
LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.714
N177_2985
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.706
N177_1698
Putative LysR family transcriptional regulatory protein.
  
     0.700
N177_2360
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.695
N177_0146
LysR family transcriptional regulator YeiE; Belongs to the LysR transcriptional regulatory family.
  
     0.663
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.