Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
N177_0917 | N177_2478 | Sel1 domain protein repeat-containing protein. | Hypothetical protein. | 0.493 |
N177_2476 | N177_2477 | Hypothetical protein. | Hypothetical protein. | 0.773 |
N177_2476 | N177_2478 | Hypothetical protein. | Hypothetical protein. | 0.510 |
N177_2477 | N177_2476 | Hypothetical protein. | Hypothetical protein. | 0.773 |
N177_2477 | N177_2478 | Hypothetical protein. | Hypothetical protein. | 0.510 |
N177_2478 | N177_0917 | Hypothetical protein. | Sel1 domain protein repeat-containing protein. | 0.493 |
N177_2478 | N177_2476 | Hypothetical protein. | Hypothetical protein. | 0.510 |
N177_2478 | N177_2477 | Hypothetical protein. | Hypothetical protein. | 0.510 |
N177_2478 | N177_2479 | Hypothetical protein. | Metallo-beta-lactamase family protein, RNA-specific. | 0.405 |
N177_2478 | N177_2480 | Hypothetical protein. | Geranyltranstransferase (farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family. | 0.400 |
N177_2478 | N177_3136 | Hypothetical protein. | TonB, C-terminal domain protein. | 0.611 |
N177_2478 | N177_3824 | Hypothetical protein. | Hypothetical protein. | 0.425 |
N177_2479 | N177_2478 | Metallo-beta-lactamase family protein, RNA-specific. | Hypothetical protein. | 0.405 |
N177_2479 | N177_2480 | Metallo-beta-lactamase family protein, RNA-specific. | Geranyltranstransferase (farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family. | 0.762 |
N177_2480 | N177_2478 | Geranyltranstransferase (farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.400 |
N177_2480 | N177_2479 | Geranyltranstransferase (farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family. | Metallo-beta-lactamase family protein, RNA-specific. | 0.762 |
N177_3136 | N177_2478 | TonB, C-terminal domain protein. | Hypothetical protein. | 0.611 |
N177_3136 | N177_3824 | TonB, C-terminal domain protein. | Hypothetical protein. | 0.984 |
N177_3824 | N177_2478 | Hypothetical protein. | Hypothetical protein. | 0.425 |
N177_3824 | N177_3136 | Hypothetical protein. | TonB, C-terminal domain protein. | 0.984 |