Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
N177_0395 | N177_0576 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
N177_0395 | N177_1288 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
N177_0395 | N177_1493 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
N177_0395 | N177_2221 | Multi-sensor hybrid histidine kinase. | Two-component hybrid sensor and regulator. | 0.999 |
N177_0395 | N177_2582 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
N177_0395 | N177_2805 | Multi-sensor hybrid histidine kinase. | Phytochrome, two-component sensor histidine kinase. | 0.986 |
N177_0395 | N177_2806 | Multi-sensor hybrid histidine kinase. | Response regulator. | 0.984 |
N177_0395 | N177_2807 | Multi-sensor hybrid histidine kinase. | Two component sensor kinase. | 0.984 |
N177_0395 | N177_2810 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
N177_0494 | N177_2806 | Tungsten-containing formate dehydrogenase beta subunit. | Response regulator. | 0.914 |
N177_0576 | N177_0395 | Hypothetical protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
N177_0576 | N177_1288 | Hypothetical protein. | Hypothetical protein. | 0.999 |
N177_0576 | N177_1493 | Hypothetical protein. | Hypothetical protein. | 0.999 |
N177_0576 | N177_2221 | Hypothetical protein. | Two-component hybrid sensor and regulator. | 0.999 |
N177_0576 | N177_2582 | Hypothetical protein. | Hypothetical protein. | 0.999 |
N177_0576 | N177_2805 | Hypothetical protein. | Phytochrome, two-component sensor histidine kinase. | 0.983 |
N177_0576 | N177_2806 | Hypothetical protein. | Response regulator. | 0.983 |
N177_0576 | N177_2807 | Hypothetical protein. | Two component sensor kinase. | 0.991 |
N177_0576 | N177_2810 | Hypothetical protein. | Hypothetical protein. | 0.999 |
N177_1288 | N177_0395 | Hypothetical protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
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