STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_2831Biopolymer transport protein ExbD/TolR. (129 aa)    
Predicted Functional Partners:
N177_2832
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.998
N177_2829
Hypothetical protein.
 
 
 0.996
tolQ
MotA/TolQ/ExbB proton channel family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.980
N177_1034
Hypothetical protein.
  
 
 0.975
N177_2830
Biopolymer transport protein ExbD/TolR.
 
     0.925
N177_2833
Hypothetical protein.
 
     0.811
N177_2828
Hypothetical protein; Distant similarity with heme-degrading oxygenase IsdG.
 
     0.708
N177_3689
OmpA/MotB.
  
 
 0.678
N177_2834
TonB-dependent hemin, ferrichrome receptor.
 
  
 0.660
N177_2354
Ferrichrome-iron receptor.
 
  
 0.651
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.