STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_3001Oligopeptide transport ATP-binding protein OppD; TCDB 3.A.1.5.1; Belongs to the ABC transporter superfamily. (328 aa)    
Predicted Functional Partners:
N177_2997
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
  0.995
N177_2239
Putative oligopeptide ABC transporter, permease component.
 
 
  0.984
N177_2427
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
 
  0.982
N177_1710
Putative glutathione transporter, permease component; Overlaps CDS with the same product name.
 
 
  0.979
N177_2602
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
 
  0.976
N177_2138
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
 
  0.975
N177_1684
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
 
  0.973
N177_4170
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
 
  0.967
N177_2996
Dipeptide transport system permease protein DppB; TCDB 3.A.1.5.2.
 
  0.961
N177_3002
Oligopeptide transport ATP-binding protein OppF; TCDB 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
 
0.922
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.