STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_3461Periplasmic substrate-binding protein, ABC-type iron transporter. (329 aa)    
Predicted Functional Partners:
N177_3460
Ferric iron ABC transporter, permease protein.
 
 
 0.989
N177_0129
Ferric iron ABC transporter, permease protein.
 
 
 0.933
N177_3459
Putative ferric iron transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.906
N177_2927
Ferric iron ABC transporter, permease protein.
  
 
 0.807
N177_0128
Extracellular solute-binding protein, family 1.
  
  
 
0.695
N177_3612
Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.646
N177_2928
Ferric iron ABC transporter, iron-binding protein.
     
 0.603
N177_1883
Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
  0.598
N177_3433
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 
 
  0.571
N177_3434
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 
 
  0.571
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.