STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_3499Copper-containing nitrite reductase; Belongs to the multicopper oxidase family. (345 aa)    
Predicted Functional Partners:
N177_1118
Pseudoazurin precursor.
 
 
 0.968
N177_2745
Copper tolerance protein.
 
 
 0.790
N177_2812
Cytochrome c oxidase polypeptide II.
     
 0.740
N177_3328
Cytochrome c oxidase polypeptide II.
     
 0.740
N177_2326
Hypothetical protein.
   
 0.691
N177_0242
Sulfite dehydrogenase cytochrome subunit SoxD.
    
 0.680
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.676
N177_0939
Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.674
N177_2816
Putative cytochrome c class I protein, probably cytochrome c4.
  
 
 0.674
N177_1135
Hypothetical protein.
  
 
 0.622
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.