STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_3657ROK family Glucokinase with ambiguous substrate specificity. (304 aa)    
Predicted Functional Partners:
N177_3125
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.864
N177_3763
Mannose-1-phosphate guanylyltransferase (GDP); Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.864
N177_0023
Glucose-6-phosphate isomerase.
  
 
 0.815
N177_3655
DNA polymerase IV; Overlaps CDS with the same product name.
       0.808
N177_3656
DNA polymerase IV; Overlaps CDS with the same product name.
       0.787
N177_3379
Fructose-1,6-bisphosphatase, GlpX type.
     
 0.776
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.771
N177_1333
ATPase YjeE, predicted to have essential role in cell wall biosynthesis; Predicted phosphotransferase.
    
  0.757
N177_4150
Maltodextrin glucosidase.
    
 0.740
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.737
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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