STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94083.1Putative protein. (30 aa)    
Predicted Functional Partners:
gapD
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) catalyzes the sixth step of glycolysis and thus serves to break down glucose for energy and carbon molecules by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. Also it plays an important role in gluconeogenesis; Acts as an homotetramer; Localized in the cytoplasm; High confidence in function and specificity.
       0.773
CAZ94084.1
Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Signal peptide cleaved between the residues 21 and 22; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.590
degP
Peptidase Do, family S1; Peptidase Do is a heat shock protein which is required for bacterial growth at elevated temperatures. It is involved in the degradation of damaged proteins. Belongs to the family 1 of the serine peptidase. Displays a catalytic triad His, Asp and Ser. Contains a C-terminal PDZ domain. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity.
       0.506
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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