STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94173.1Glycoside hydrolase, family GH15; Glycoside hydrolases hydrolyse the glycosidic bond between two or more carbohydrates or between a carbohydrate and a non-carbohydrate moiety. This enzyme belongs to the family 15 of the glycoside hydrolases. Localized in the cytoplasm; Specificity unclear. (600 aa)    
Predicted Functional Partners:
otsAB
Trehalose-6-phosphate synthase/phosphatase, family GT20; This enzyme is involved in the biosynthesis of trehalose. It is a fusion protein between the trehalose-6-phosphate synthase (OtsA) and the trehalose-6-phosphate phosphatase (OtsB). Trehalose-6-phosphate synthase catalyzes the reaction: UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate. It belongs to the family 20 of the glycosyltransferases (GT20). trehalose-6-phosphate phosphatase catalyzes the reaction: trehalose 6-phosphate + H2O = trehalose + phosphate. Localized in the cytoplasm; High confidence i [...]
 
  
 0.992
CAZ94312.1
Conserved hypothetical protein; Protein distantly related to the glycoside hydrolases of the families GH37 and GH63 (clan GH-G); Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Localized in the outer membrane.
 
  
 0.919
mapA
Maltose phosphorylase, family GH65; Maltose phosphorylase catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. It belongs to the family 65 of the glycoside hydrolases. Involved in the maltose metabolism; High confidence in function and specificity.
     
 0.903
CAZ95275.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
 
      0.841
CAZ95923.1
Mechanosensitive channels provide protection against hypo-osmotic shock, responding both to stretching of the cell membrane and to membrane depolarisation; Contains four transmembrane helices; Belongs to the small- conductance MS channels; Localized in the cytoplasmic membrane; Specificity unclear.
 
    0.464
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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