STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94181.1Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the outer membrane; Conserved hypothetical protein. (267 aa)    
Predicted Functional Partners:
ccpA1
Di-heme cytochrome c peroxidase (CCP) reduces hydrogen peroxide to water using c-type heme as an oxidizable substrate. However, since it possesses two, instead of one, heme prosthetic groups, CCPs reduce hydrogen peroxide without the need to generate semi-stable free radicals. The two heme groups have significantly different redox potentials. CCP is structured into two domains, each containing one c-type haem group, with a calcium-binding site at the domain interface. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 17 and 18; Localized in the cytoplasmic [...]
 
     0.915
CAZ94183.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.913
CAZ97979.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.454
mioX
Myo-inositol oxygenase is a non-heme iron enzyme, which catalyzes the conversion of myo-inositol to D-glucuronic acid. This enzyme can be either involved of in myo-inositol catabolism or in UDP-glucuronic acid biosynthesis. Localized in cytoplasm; High confidence in function and specificity.
  
     0.454
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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