STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CAZ95142.1Putative membrane protein; Contains a signal peptide cleaved between the residues 27 and 28 followed by a transmembrane segment; Possibly localized in the cytoplasmic membrane; Hypothetical protein. (53 aa)    
Predicted Functional Partners:
CAZ96759.1
CsbD-like protein; CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear. Localized in the cytoplasm; Function unclear; Belongs to the UPF0337 (CsbD) family.
 
  
 0.764
CAZ95143.1
Conserved hypothetical protein; Putative lipoprotein signal peptide cleaved between the residues 22 and 23; Possibly localized in the outer membrane.
     
 0.703
CAZ95140.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
    0.597
CAZ97689.1
Protein conserved in the bacteria of the chlorobiaceae family; Signal peptide cleaved between the residues 21 and 22; Probably localized in the periplasmic space; Conserved hypothetical protein.
   
    0.509
CAZ95144.1
Two-component system-Response regulator, effector domain; The response regulator proteins are involved in the two-component signal transduction systems to detect and respond to environmental changes. Usually, the protein consists of two domains, an N-terminal response regulator receiver domain that is substrate for a histidine protein kinase sensor, and a variable C-terminal effector domain with DNA-binding activity that acts as transcriptional regulator. This sequence corresponds to the effector domain only, an AraC-type HTH domain; Family membership.
 
     0.468
CAZ95146.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains two transmembrane segments and two N-terminal PAS/PAC domains involved in many signalling proteins where they are used as a signal sensor domain; Localized in the cytoplasmic membrane; Family membership.
 
    0.468
CAZ95141.1
Conserved hypothetical protein belonging to the DUF159 family; Localized in the cytoplasm; Belongs to the SOS response-associated peptidase family.
       0.465
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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