STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94084.1Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Signal peptide cleaved between the residues 21 and 22; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (208 aa)    
Predicted Functional Partners:
CAZ98896.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.692
CAZ97266.1
Metal ion transporter; This protein is a permease possibly responsible for zinc uptake; Belongs to the ZIP (zinc transporter proteins) family; Contains seven transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear.
  
     0.669
tolA
TolA, involved in the tonB-independent uptake of proteins, interacts with the TolQ and TolR, cytoplasmic membrane proteins and with the Pal protein (OprL) in the outer membrane. The transport is energized by the proton motive force. The Tol-Pal complex is required for maintaining outer membrane integrity, the transport (uptake) filamentous DNA and is the conduct for bacteriophages; TolA is anchored to the cytoplasmic membrane by a single transmembrane spanning segment near the N-terminus, leaving most of the protein exposed to the periplasm; High confidence in function and specificity.
  
     0.665
CAZ94557.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.655
gapD
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) catalyzes the sixth step of glycolysis and thus serves to break down glucose for energy and carbon molecules by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. Also it plays an important role in gluconeogenesis; Acts as an homotetramer; Localized in the cytoplasm; High confidence in function and specificity.
       0.624
CAZ97113.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 26 and 27; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
  
     0.622
CAZ94083.1
Putative protein.
       0.590
CAZ95209.1
Conserved hypothetical protein; Probably localized in the cytoplasm; Belongs to the arginase family.
  
     0.583
recD
Exodeoxyribonuclease V, alpha chain; The Exonuclease V is a multifunctional nuclease required for efficient DNA repair. It catalyzes the unwinding of double-stranded DNA and the cleavage of single-stranded DNA and it stimulates local genetic recombination. All of these activities require concomitant hydrolysis of ATP; Belongs to the helicase family, UvrD subfamily; Localized in the cytoplasm; High confidence in function and specificity.
  
     0.580
CAZ96885.1
Possible TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; The signal peptide is cleaved between the residues 21 and 22; Family membership.
  
     0.579
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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