STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95170.1Acetyltransferase; Probably required for the acetyl modification of sugars of the oligosaccharides during the exopolysaccharide biosynthesis; Contains ten transmenbrane segments; Belongs to the acyltransferase 3 family; Localized in the cytoplasmic membrane; Family membership. (383 aa)    
Predicted Functional Partners:
CAZ95169.1
O-acetyltransferase; Probably required for the acetyl modification of sugars of the oligosaccharides during the exopolysaccharide biosynthesis; Contains ten transmenbrane segments; Belongs to the acyltransferase 3 family; Localized in the cytoplasmic membrane; Family membership.
     
 0.590
CAZ95171.1
Mannosyltransferase, family GT4; Mannosyltransferase catalyses the transfer of mannose from GDP-mannose to specific acceptor molecules, forming glycosidic bonds. Belongs to the family 4 of the glycosyltransferases. Likely involved in the biosynthesis of O-antigen. Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.581
etkA
Tyrosine-protein kinase; May be involved in the production and the transport of exopolysaccharides; Contains a N-terminal transmembrane segment; Belongs to the etk/wzc family; Localized in the cytoplasmic membrane; Specificity unclear.
     
 0.540
CAZ95167.1
O-antigen transporter; May be involved in the Lipopolysaccharide O antigen biosynthesis, translocating the nascent polysaccharidic O-antigen molecules and/or ligating them to lipid A core units; Contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear.
  
  
 0.457
CAZ95172.1
Glycosyltransferase, family GT4; Glycosyltransferase that could be involved in the exopolysaccharide or lipopolysaccharide biosynthesis; Belongs to the family 4 of glycosyltransferase (GT4); Localized in the cytoplasm; Specificity unclear.
  
  
 0.448
CAZ98330.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.421
CAZ95168.1
Conserved hypothetical membrane protein; Contains ten transmenbrane segments; Localized ion the cytoplasmic membrane; Conserved hypothetical protein.
       0.404
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.