STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94192.1Conserved hypothetical membrane protein; Contains two transmembrane segments; Probably localized in the cytoplasmic membrane; Conserved hypothetical protein. (97 aa)    
Predicted Functional Partners:
CAZ94190.1
The response regulator proteins are involved in the two-component signal transduction systems to detect and respond to environmental changes. The protein consists of two domains, an N-terminal response regulator receiver domain that is substrate for a histidine protein kinase sensor, and a variable C-terminal effector domain with DNA-binding activity, a LytTR-type HTH domain, that acts as transcriptional regulator; Family membership.
 
 
 0.725
CAZ94191.1
Conserved hypothetical protein; Contains two transmembrane segments; Probably localized in the cytoplasmic membrane.
 
    
0.701
CAZ94941.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.606
CAZ97071.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.581
CAZ96538.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.579
CAZ94756.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.576
CAZ94193.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains four and two transmembrane segments in the N- and C- terminal domain respectively; Localized in the cytoplasmic membrane; Family membership.
 
    
0.514
CAZ94697.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
  
     0.497
CAZ98166.1
Peptidase, family U48; Conserved peptidase belonging to the family U48, which includes prenyl peptidases. Its exact specificity is unknown. Features eight transmembrane helices. Localized in the cytoplasmic membrane; Function unclear.
 
     0.439
CAZ97958.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.417
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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