STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95263.1N-Acetylmuramoyl-L-alanine amidase hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in peptidoglycan; Contains a signal peptide cleaved between the residues 27 and 28; Localized in the periplasmic space; High confidence in function and specificity. (357 aa)    
Predicted Functional Partners:
amiA
N-acetylmuramoyl-L-alanine amidase; The protein contains two domains. A N-terminal N-acetylmuramoyl-L-alanine amidase domain (230 residues) that hydrolyzes the amide bond between N-acetylmuramoyl residues and L-amino acid residues in bacterial cell walls and a C-terminal domain (200 residues) of unknown function; Contains one N-terminal transmembrane segment; Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
 0.935
CAZ96912.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.678
CAZ95760.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
 
 
 0.640
CAZ98769.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Conserved hypothetical protein.
 
 
 0.631
CAZ95253.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
 
 0.620
CAZ97883.1
Beta-N-acetylglucosaminidase, family GH3 / Serine peptidase, family S12; This is a modular protein with a N-terminal beta-N-acetylglucosaminidase domain and a C-terminal serine peptidase domain. The beta-N-acetylglucosaminidase module belongs to the family 3 of the glycoside hydrolases. It catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides. The C-terminal domain belongs to the family 12 of the serine peptidases D-Ala-D-Ala carboxypeptidase B and aminopeptidase DmpB. Features a signal peptide cleaved between residues 19 an [...]
    
 0.587
CAZ94704.1
Conserved protein containing five thrombospondin type 3 repeats (TSP3). TSP3 are calcium binding domains; Features an uncleaved signal peptide; Localized in the cytoplasmic meembrane; Conserved hypothetical protein.
  
     0.586
CAZ95477.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.581
CAZ96952.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.578
CAZ98294.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
  
 0.568
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.