STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95304.1Glycoside hydrolase, family GH13; Glycoside hydrolases hydrolyse the glycosidic bond between two or more carbohydrates or between a carbohydrate and a non-carbohydrate moiety. Belongs to the family 13 of the glycoside hydrolases; Specificity unclear. (592 aa)    
Predicted Functional Partners:
CAZ98763.1
Conserved amino acid transporter. Its exact specificity is unknown. Features twelve transmembrane helices. Localized in the cytoplasmic membrane; Family membership.
   
 0.869
mapA
Maltose phosphorylase, family GH65; Maltose phosphorylase catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. It belongs to the family 65 of the glycoside hydrolases. Involved in the maltose metabolism; High confidence in function and specificity.
  
  
 0.815
glpQ
Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols; Signal peptide of lipoprotein cleaved between the residues 17 and 18; Localized in the outer membrane; High confidence in function and specificity.
       0.777
CAZ95301.1
Conserved hypothetical protein; Protein of unknown function; Belongs to the DUF1697 family; Localized in the cytoplasm.
       0.773
CAZ95302.1
Flavoprotein; This is a family that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases; Seems to contain a FAD binding domain also found in the pyridine nucleotide-disulphide reductases (PNDR); Localized in the cytoplasm; Function unclear.
       0.773
pgmB
Beta-phosphoglucomutase is involved in maltose metabolism. It catalyzes the reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate. Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.749
CAZ94939.1
Carbohydrate binding module belonging to the family CBM48. CBM48s usually bind to glycogen and are associated to GH13 modules or to AMP-activated protein kinases. The exact function of this isolated CBM48 is unknown. Localized in the cytoplasm; Specificity unclear.
 
  
 0.688
susB
Alpha-glucosidase, family GH97; The Sus (starch utilization system) proteins are involved in the starch catabolism; The SusB protein is an alpha-glucosidase that hydrolyzes the alpha-1,4 linkages of maltose and maltotriose and the alpha-1,4 and alpha-1,6 linkages of the panose; It belongs to the family 97 of glycoside hydrolases; Signal peptide cleaved between the residue 24 and 25; Localized in the periplasmic space; High confidence in function and specificity.
     0.619
malS
Alpha-amylase, family GH13; Alpha-amylase catalyzes the endohydrolysis of 1,4-alpha-D-glucosidic linkages in oligosaccharides and polysaccharides. Belongs to the family 13 of the glycoside hydrolases. Involved in starch metabolism. Features an uncleaved signal peptide. Localized into the cytoplasmic membrane; High confidence in function and specificity.
 
     0.583
CAZ95307.1
The LacI-type transcriptional regulators are involved in the repression and/or the positive regulation of genes encoding for catabolic enzymes and are important in the coordination of operons; They contain a N-terminal lacI-type HTH domain involved in the binding of the protein to the operator sequences in the DNA and a C- terminal periplasmic binding protein domain that are the primary receptors for chemotaxis and transport of many sugar based solutes that act as inducers; Localized in the cytoplasm; Family membership.
  
  
 0.528
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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