Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95386.1 | dnaE2 | ZOBELLIA_1330 | ZOBELLIA_1256 | Conserved hypothetical protein; Localized in the cytoplasm. | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.512 |
| CAZ95386.1 | dnaX | ZOBELLIA_1330 | ZOBELLIA_489 | Conserved hypothetical protein; Localized in the cytoplasm. | DNA polymerase III, gamma/tau chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.841 |
| CAZ96754.1 | CAZ98630.1 | ZOBELLIA_2604 | ZOBELLIA_4495 | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | Conserved hypothetical protein. Localized in the cytoplasm. | 0.945 |
| CAZ96754.1 | dinB2 | ZOBELLIA_2604 | ZOBELLIA_1257 | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.476 |
| CAZ96754.1 | dnaE2 | ZOBELLIA_2604 | ZOBELLIA_1256 | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.555 |
| CAZ96754.1 | dnaN | ZOBELLIA_2604 | ZOBELLIA_3829 | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.934 |
| CAZ96754.1 | dnaX | ZOBELLIA_2604 | ZOBELLIA_489 | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | DNA polymerase III, gamma/tau chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.944 |
| CAZ96754.1 | holB | ZOBELLIA_2604 | ZOBELLIA_1723 | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | The delta prime subunit of DNA polymerase III is part of the 'clamp' loading complex that assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.918 |
| CAZ98630.1 | CAZ96754.1 | ZOBELLIA_4495 | ZOBELLIA_2604 | Conserved hypothetical protein. Localized in the cytoplasm. | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | 0.945 |
| CAZ98630.1 | dnaE2 | ZOBELLIA_4495 | ZOBELLIA_1256 | Conserved hypothetical protein. Localized in the cytoplasm. | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.888 |
| CAZ98630.1 | dnaN | ZOBELLIA_4495 | ZOBELLIA_3829 | Conserved hypothetical protein. Localized in the cytoplasm. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.996 |
| CAZ98630.1 | dnaX | ZOBELLIA_4495 | ZOBELLIA_489 | Conserved hypothetical protein. Localized in the cytoplasm. | DNA polymerase III, gamma/tau chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.995 |
| CAZ98630.1 | holB | ZOBELLIA_4495 | ZOBELLIA_1723 | Conserved hypothetical protein. Localized in the cytoplasm. | The delta prime subunit of DNA polymerase III is part of the 'clamp' loading complex that assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.995 |
| dinB2 | CAZ96754.1 | ZOBELLIA_1257 | ZOBELLIA_2604 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | 0.476 |
| dinB2 | dnaE2 | ZOBELLIA_1257 | ZOBELLIA_1256 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.974 |
| dinB2 | dnaN | ZOBELLIA_1257 | ZOBELLIA_3829 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.928 |
| dinB2 | holB | ZOBELLIA_1257 | ZOBELLIA_1723 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | The delta prime subunit of DNA polymerase III is part of the 'clamp' loading complex that assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | 0.623 |
| dnaE2 | CAZ95386.1 | ZOBELLIA_1256 | ZOBELLIA_1330 | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.512 |
| dnaE2 | CAZ96754.1 | ZOBELLIA_1256 | ZOBELLIA_2604 | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | Nuclease; Contains a N-terminal exonuclease domain found in ribonuclease T and the epsilon subunit of DNA polymerase III and, in the middle part, a GIY-YIG catalytic domain Localized in the cytoplasm; Function unclear. | 0.555 |
| dnaE2 | CAZ98630.1 | ZOBELLIA_1256 | ZOBELLIA_4495 | The alpha subunit of DNA polymerase III is responsible of the polymerase activity; Contains a N-terminal PHP domain (phosphoesterase) and a C-terminal OB module (oligonucleotide/oligosaccharide-binding fold) involved in the DNA binding; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It also exhibits a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical protein. Localized in the cytoplasm. | 0.888 |
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