STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95321.1Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 30 and 31; Localized in the outer membrane; Conserved hypothetical protein. (1250 aa)    
Predicted Functional Partners:
CAZ95322.1
Conserved hypothetical membrane protein; Contains three C-terminal transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.903
CAZ95323.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
  
 0.786
CAZ97962.1
Conserved hypothetical membrane protein; Contains three transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.783
CAZ96734.1
Methyltransferases modifies DNA, RNA, proteins and small molecules for regulatory purposes using the S-adenosyl-L-methionine as coenzyme; Localized in the cytoplasm; Specificity unclear.
  
     0.635
CAZ95462.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.576
CAZ95320.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
 
     0.469
CAZ96967.1
Conserved hypothetical membrane protein; Contains a putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
  
     0.469
ggcX
Vitamin K-dependent gamma-glutamyl carboxylase is involved in the Vitamin K-dependent carboxylation of multiple amino-terminal glutamate residues in various proteins. It converts glutamate residues to gamma-carboxyglutamate; Contains six transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
     0.465
CAZ98339.1
MORN repeat protein; Conserved protein containing seven MORN repeats; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Function unclear.
  
     0.434
CAZ94796.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.429
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.