STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95361.1Conserved hypothetical protein; Localized in the cytoplasm. (132 aa)    
Predicted Functional Partners:
CAZ95365.1
Conserved hypothetical membrane protein; Contains six transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.858
pucH
Allantoinase is involved in purine metabolism. It catalyzes the reaction: (S)-allantoin + H2O = allantoate. Binds one zinc ion. Localized in the cytoplasm; High confidence in function and specificity.
       0.762
ppmA
Polyprenol phosphate mannose synthase catalyses the transfer of mannose from GDP-mannose to polyprenol phosphate. Polyprenol phosphate mannose is a sugar donor; Belongs to the family 2 of the glycosyltransferases (GT2); Localized in the cytoplasm; High confidence in function and specificity.
       0.762
CAZ97281.1
Conserved hypothetical protein; Localized in cytoplasm.
  
     0.734
CAZ95338.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.711
CAZ94077.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplamic space; Conserved hypothetical protein.
  
     0.704
CAZ94763.1
Acyl-CoA binding protein (ACBP) is a small (~10 kDa) protein that binds medium- and long-chain acyl-CoA esters with high affinity, and may act as an intra- cellular carrier of acyl-CoA esters. It is a mainly-alpha protein, consisting of 5 short alpha-helices and 3 connecting beta-strands. Localized in the cytoplasm; Family membership.
  
     0.682
CAZ95648.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.681
CAZ94698.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.664
CAZ98193.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.636
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.