STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94211.1Conserved hypothetical protein; Probably localized in the cytoplasm. (167 aa)    
Predicted Functional Partners:
CAZ97835.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.654
CAZ94210.1
Conserved hypothetical protein; Protein that consists of a domain of unknown function (DUF124), Localized in the cytoplasm.
       0.610
CAZ96287.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.610
CAZ94213.1
Conserved hypothetical periplasmic protein; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.602
CAZ94212.1
Conserved Hypothetical membrane protein; Contains three transmembrane segments; Probably localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.595
CAZ96538.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.502
CAZ97111.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.480
CAZ96639.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.467
gldI
GldI, lipoprotein required for gliding motility, contains a Peptidyl-prolyl cis-trans isomerase (PPIase) domain; PPIases catalyze the peptidyl-prolyl isomerisation of the peptide bond preceding proline that is stabilised in the cis conformation in oligopeptides; GldI may be involved in folding cell envelope protein components of the motility machinery; Signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane or/and cytoplasmic membrane; High confidence in function and specificity.
  
    0.456
CAZ94215.1
Hypothetical membrane protein; Contains a PspC domain that is thought to be a stress-responsive transcriptional regulator, and four transmembrane segments; Probably localized in the cytoplasmic membrane; Hypothetical protein.
 
     0.453
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.