Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95381.1 | CAZ95444.1 | ZOBELLIA_1325 | ZOBELLIA_1388 | Conserved hypothetical protein; Localized in the cytoplasm. | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | 0.402 |
| CAZ95442.1 | CAZ95444.1 | ZOBELLIA_1386 | ZOBELLIA_1388 | Conserved hypothetical protein; Localized in the cytoplasm. | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | 0.527 |
| CAZ95442.1 | bioD | ZOBELLIA_1386 | ZOBELLIA_1385 | Conserved hypothetical protein; Localized in the cytoplasm. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.796 |
| CAZ95442.1 | bioF | ZOBELLIA_1386 | ZOBELLIA_1387 | Conserved hypothetical protein; Localized in the cytoplasm. | This enzyme catalyzes the 8-amino-7-oxononanoate formation used in the biotin biosynthesis. Uses the pyridoxal-phosphate as cofactor. Belongs to the class II of the pyridoxal-phosphate-dependent aminotransferases; Localized in the cytoplasm; High confidence in function and specificity. | 0.803 |
| CAZ95444.1 | CAZ95381.1 | ZOBELLIA_1388 | ZOBELLIA_1325 | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.402 |
| CAZ95444.1 | CAZ95442.1 | ZOBELLIA_1388 | ZOBELLIA_1386 | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.527 |
| CAZ95444.1 | CAZ98083.1 | ZOBELLIA_1388 | ZOBELLIA_3945 | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | TonB-dependent Transducer; Protein localized in the outer membrane involved in uptake of macromolecules (here, Possibly sugars) that are too large to diffuse via the outer membrane porins; The presence of an additional N-terminal extension that probably interacts with an anti-sigma factor, would be responsible of the signal transduction; Contains a carboxypeptidase regulatory domain (120-190), and a Plug module (210-315) acting as the channel gate; The signal peptide is cleaved between the residue 28 and 29; Family membership. | 0.485 |
| CAZ95444.1 | CAZ98084.1 | ZOBELLIA_1388 | ZOBELLIA_3946 | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the outer membrane; Family membership. | 0.436 |
| CAZ95444.1 | bioD | ZOBELLIA_1388 | ZOBELLIA_1385 | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.592 |
| CAZ95444.1 | bioF | ZOBELLIA_1388 | ZOBELLIA_1387 | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | This enzyme catalyzes the 8-amino-7-oxononanoate formation used in the biotin biosynthesis. Uses the pyridoxal-phosphate as cofactor. Belongs to the class II of the pyridoxal-phosphate-dependent aminotransferases; Localized in the cytoplasm; High confidence in function and specificity. | 0.527 |
| CAZ98083.1 | CAZ95444.1 | ZOBELLIA_3945 | ZOBELLIA_1388 | TonB-dependent Transducer; Protein localized in the outer membrane involved in uptake of macromolecules (here, Possibly sugars) that are too large to diffuse via the outer membrane porins; The presence of an additional N-terminal extension that probably interacts with an anti-sigma factor, would be responsible of the signal transduction; Contains a carboxypeptidase regulatory domain (120-190), and a Plug module (210-315) acting as the channel gate; The signal peptide is cleaved between the residue 28 and 29; Family membership. | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | 0.485 |
| CAZ98083.1 | CAZ98084.1 | ZOBELLIA_3945 | ZOBELLIA_3946 | TonB-dependent Transducer; Protein localized in the outer membrane involved in uptake of macromolecules (here, Possibly sugars) that are too large to diffuse via the outer membrane porins; The presence of an additional N-terminal extension that probably interacts with an anti-sigma factor, would be responsible of the signal transduction; Contains a carboxypeptidase regulatory domain (120-190), and a Plug module (210-315) acting as the channel gate; The signal peptide is cleaved between the residue 28 and 29; Family membership. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the outer membrane; Family membership. | 0.955 |
| CAZ98084.1 | CAZ95444.1 | ZOBELLIA_3946 | ZOBELLIA_1388 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the outer membrane; Family membership. | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | 0.436 |
| CAZ98084.1 | CAZ98083.1 | ZOBELLIA_3946 | ZOBELLIA_3945 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the outer membrane; Family membership. | TonB-dependent Transducer; Protein localized in the outer membrane involved in uptake of macromolecules (here, Possibly sugars) that are too large to diffuse via the outer membrane porins; The presence of an additional N-terminal extension that probably interacts with an anti-sigma factor, would be responsible of the signal transduction; Contains a carboxypeptidase regulatory domain (120-190), and a Plug module (210-315) acting as the channel gate; The signal peptide is cleaved between the residue 28 and 29; Family membership. | 0.955 |
| bioD | CAZ95442.1 | ZOBELLIA_1385 | ZOBELLIA_1386 | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.796 |
| bioD | CAZ95444.1 | ZOBELLIA_1385 | ZOBELLIA_1388 | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | 0.592 |
| bioD | bioF | ZOBELLIA_1385 | ZOBELLIA_1387 | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | This enzyme catalyzes the 8-amino-7-oxononanoate formation used in the biotin biosynthesis. Uses the pyridoxal-phosphate as cofactor. Belongs to the class II of the pyridoxal-phosphate-dependent aminotransferases; Localized in the cytoplasm; High confidence in function and specificity. | 0.984 |
| bioF | CAZ95442.1 | ZOBELLIA_1387 | ZOBELLIA_1386 | This enzyme catalyzes the 8-amino-7-oxononanoate formation used in the biotin biosynthesis. Uses the pyridoxal-phosphate as cofactor. Belongs to the class II of the pyridoxal-phosphate-dependent aminotransferases; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.803 |
| bioF | CAZ95444.1 | ZOBELLIA_1387 | ZOBELLIA_1388 | This enzyme catalyzes the 8-amino-7-oxononanoate formation used in the biotin biosynthesis. Uses the pyridoxal-phosphate as cofactor. Belongs to the class II of the pyridoxal-phosphate-dependent aminotransferases; Localized in the cytoplasm; High confidence in function and specificity. | Metallopeptidase, family M61; This metallopeptidase encompasses a N-terminal catalytic domain belonging to the family M61 and a C-terminal PDZ domain. The active site residues are located in an HEXXH motif. The conserved Glu, 30 residues to the C-terminus of the HEXXH motif, likely is the third zinc ligand. PDZ domain bind either the carboxyl-terminal sequences of proteins or internal peptide sequences. Features a signal peptide cleaved between residues 18 and 19. localized in the periplasm; Specificity unclear. | 0.527 |
| bioF | bioD | ZOBELLIA_1387 | ZOBELLIA_1385 | This enzyme catalyzes the 8-amino-7-oxononanoate formation used in the biotin biosynthesis. Uses the pyridoxal-phosphate as cofactor. Belongs to the class II of the pyridoxal-phosphate-dependent aminotransferases; Localized in the cytoplasm; High confidence in function and specificity. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.984 |