STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94212.1Conserved Hypothetical membrane protein; Contains three transmembrane segments; Probably localized in the cytoplasmic membrane; Conserved hypothetical protein. (159 aa)    
Predicted Functional Partners:
CAZ94213.1
Conserved hypothetical periplasmic protein; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
    0.778
CAZ94215.1
Hypothetical membrane protein; Contains a PspC domain that is thought to be a stress-responsive transcriptional regulator, and four transmembrane segments; Probably localized in the cytoplasmic membrane; Hypothetical protein.
 
    0.738
CAZ98667.1
Conserved hypothetical membrane protein; Contains four transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.640
CAZ98627.1
Non-peptidase protein, Family M1; Protein displaying similarity with the metallopeptidases of the family 1 (M1), but lacking the catalytic HEXXH motif; Contains a C-terminal domain of unknown function; Signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Family membership.
  
     0.603
CAZ94211.1
Conserved hypothetical protein; Probably localized in the cytoplasm.
       0.595
CAZ94214.1
Transcriptional regulator belonging to the PadR family. Features a helix-turn-helix DNA binding motif. Localized in the cytoplasm; Specificity unclear.
       0.576
CAZ98248.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 21 and 22; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.576
CAZ96885.1
Possible TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; The signal peptide is cleaved between the residues 21 and 22; Family membership.
  
     0.501
CAZ95985.1
Conserved hypothetical periplasmic protein; Contains three MORN repeat variants. The MORN (Membrane Occupation and Recognition Nexus) repeat is found in multiple copies in several proteins. Signal peptide cleaved between the residues 21 and 22; Localized in periplasmic space; Conserved hypothetical protein.
  
     0.494
CAZ98193.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.493
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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